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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918909.1_cds_XP_016468230.1_60893
CDS Infomation

[gene=LOC107790784] [db_xref=GeneID:107790784] [protein=homeobox-leucine zipper protein HDG11-like] [protein_id=XP_016468230.1] [location=join(191458..191570,191874..191991,192106..192294,192399..192863,192996..193097,193186..193398,193487..193667,193857..194125,194438..194527,194619..195020)] [gbkey=CDS]
Sequence

ATGGAATATGGTGTTACCTCCAGCAGCAGCGGCGGCGTCGATGCCTCTGAAACTCACCGG
AAAAAGAAACGTTTCCATCGGCACACAGCACACCAAATTCAAAGGCTTGAAGCGGTGTTC
AAAGAATGTCCTCATCCAGACGACAAGTCCAGATTGCAGTTAAGCAAGGATTTGAGTTTG
GCTCCTCGTCAGATAAAGTTTTGGTTCCAAAATAGAAGGACTCAATTGAAGAGTCAACTT
GAGCGAGCAGATAATTGTGCGCTTCGAGCAGAAAATGATAGAATTCGACGTGAAAACATA
GCAATAAGGGAAGCCATCAAGAATGTGATATGTCCATCTTGTGGAGGCCCTTCAGTTACT
GAAGACTCTTATTTTGATGAACAAAAAATGAGAATGGAGAATATGCAACTAAAAGAAGAG
CTTGACAAAATTTCAAGCATTACTGCTAAGTATATAGGGAGGCCTATTTCGCAACTCCCA
CCAGTACAACCTATTCATCCGTCCTCATTAAACTTAATGTCCATGTCTAGTTTTGGACTA
ACTGGCCCGTCCCTTGATCTCCATCTTCTCCCAGGAAGTTCAATGAGTACTCTTCCAAGT
TTACCATTTCCTACATTGAACATCTCAGACATGGATAAGTCACTTATGGCTGATATTGCT
GGCAATTCCATGGAGGAATTGATTAGATTGTTGCAAACCAATGAACCTTTGTGGACAAAG
TCCACAACTGATGGCAGAGACGTACTTGACCTTGATAGTTACAACCAAATCTTTCCGAGG
GCTAACAGTTCGTTGAAAAATCCAAATGTTTGCATTGAGGCTTCCAGGGATTCAGGTGTT
GTGATCATGAATGGTTTAGCATTAGTTAACATGTTTATGGATGCGAACAAGTGGGTGGAA
TTCTTTCCTACGGTTGTTTCAAAGGCAAGAACAATTGAAAGAATATCGTGTGGTGTAATG
GGCGGCCGAAGTAGTACATTGCAATTGATGTATGAAGAATTGCAAGCGCTTTCACCTTTG
GTCCCGATGCGACAATCGTTTTTCCTTAGGTTTTGCCAGCAGATTGAGCAAGGTTCATGG
GCAATTGTTGATGTTTCCTATGATATTATTCAAGAAAATCAGTATCCTTCCTCTTCATGT
AAGGTTCATAGGCTCCCATCTGGATGCTTGATACAAGACATGCCCAATGGTTATTCCAAG
GTTACATGGGTGGAACACGTAGAAGTGGAAGAGAAAGGTTTAATTCATAAGCTATATAGA
GATCTTATACATAGTGGCATGGCATTTGGAGCAGAGAGATGGCTTGGTTCTCTTCAAAGA
TTGTGTGAGAGATATGCTTGTCTAATGGTCAGCGGCAAGTCTTCCCGTGAACTTGGAAGA
GTGATTCCATCACCAGAAGGAAAAAAGAGCATGATGAAATTGGCTCAAAGAATGGTGAGC
AATTTCTGTGCCAGCATCAACCCGTCCAATGGACACCAATGGAACGCCATTTCCGGATTG
GATGAATTTGAAATCAGAGCCACACTTCAAAAGAGCATTGACCCCGGCCAGCCCAATGGC
GTAATCATCAGTGCAGCTTCCACCATTTGGCTCCCTGTTCCTTCACAACATATCTTCAAT
TTCCTCAGGGACGAAATGACTCGACCTCAGTGGGATGTCCTTTCCAACCAAAATCCAGTA
CAAGAGGTAGCTCACATTGCAAATGGCTCTCACTCAGGGAACTGTATTTCTGTGCTCAGG
GCCTATAATACTAGCCAGAATAACATGTTGATACTTCAAGAAAGTTGCATAGACTCATCA
GGTTCACTAGTAATCTACAGCCCAGTGGATTTACCATCCATCAATATTGCAATGAGTGGT
GAAGACACCACTTACATCCCATTGCTACCTTCCGGTTTTACGATATCGCCGGATGGACGA
CAAGGCCAAAGGTCCAACGAGGCATCATACAGCAGCACAAATAATGGTACAATGGGAGAC
AATGGGTCAGAGGGTTCACTTGTTACTGTTGTGTTCCAGATTTTGGTGAGCAGTTTGTCA
TCATCCGCCAAAATGAGCCCAGAATCAGTAAGCACAGTTAATAACCTTATAGGCAACACT
ATCCACCAAATTAAAGTTGCCTTGAATTGCTCCACTTCCTGA

Peptide Sequence

PEP ID

XP_016468230.1
PEP Infomation

PREDICTED: homeobox-leucine zipper protein HDG11-like [Nicotiana tabacum]
Sequence

MEYGVTSSSSGGVDASETHRKKKRFHRHTAHQIQRLEAVFKECPHPDDKSRLQLSKDLSL
APRQIKFWFQNRRTQLKSQLERADNCALRAENDRIRRENIAIREAIKNVICPSCGGPSVT
EDSYFDEQKMRMENMQLKEELDKISSITAKYIGRPISQLPPVQPIHPSSLNLMSMSSFGL
TGPSLDLHLLPGSSMSTLPSLPFPTLNISDMDKSLMADIAGNSMEELIRLLQTNEPLWTK
STTDGRDVLDLDSYNQIFPRANSSLKNPNVCIEASRDSGVVIMNGLALVNMFMDANKWVE
FFPTVVSKARTIERISCGVMGGRSSTLQLMYEELQALSPLVPMRQSFFLRFCQQIEQGSW
AIVDVSYDIIQENQYPSSSCKVHRLPSGCLIQDMPNGYSKVTWVEHVEVEEKGLIHKLYR
DLIHSGMAFGAERWLGSLQRLCERYACLMVSGKSSRELGRVIPSPEGKKSMMKLAQRMVS
NFCASINPSNGHQWNAISGLDEFEIRATLQKSIDPGQPNGVIISAASTIWLPVPSQHIFN
FLRDEMTRPQWDVLSNQNPVQEVAHIANGSHSGNCISVLRAYNTSQNNMLILQESCIDSS
GSLVIYSPVDLPSINIAMSGEDTTYIPLLPSGFTISPDGRQGQRSNEASYSSTNNGTMGD
NGSEGSLVTVVFQILVSSLSSSAKMSPESVSTVNNLIGNTIHQIKVALNCSTS

Transcript Sequence

Gene sequence data has not been registered.